Version 5.4
Homo sapiens Gene: ASTN1
Summary
InnateDB Gene IDBG-105011.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ASTN1
Gene Name astrotactin 1
Synonyms ASTN
Species Homo sapiens
Ensembl Gene ENSG00000152092
Encoded Proteins
IDBP-105013
astrotactin 1
IDBP-105017
astrotactin 1
IDBP-389752
astrotactin 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Astrotactin is a neuronal adhesion molecule required for glial-guided migration of young postmitotic neuroblasts in cortical regions of developing brain, including cerebrum, hippocampus, cerebellum, and olfactory bulb (Fink et al., 1995).[supplied by OMIM, Jun 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 1:176857302-177164973
Strand Reverse strand
Band q25.2
Transcripts
ENST00000367657 ENSP00000356629
ENST00000281881
ENST00000361833 ENSP00000354536
ENST00000424564 ENSP00000395041
ENST00000473640
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0001764 neuron migration
GO:0007158 neuron cell-cell adhesion
GO:0007626 locomotory behavior
GO:0016337 single organismal cell-cell adhesion
GO:0016477 cell migration
Cellular Component
GO:0005575 cellular_component
GO:0005768 endosome
GO:0009897 external side of plasma membrane
GO:0016021 integral component of membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000026587
View Gene Order
ENSBTAG00000012953
Not yet available
Cross-References
SwissProt O14525
TrEMBL B1AJS1 Q96BL7
UniProt Splice Variant
Entrez Gene 460
UniGene Hs.495897 Hs.592586 Hs.595086
RefSeq NM_001286164 NM_004319 NM_207108
HUGO HGNC:773
OMIM 600904
CCDS CCDS1319 CCDS44280 CCDS65732
HPRD
IMGT
EMBL AB006627 AK295126 AL021398 AL022145 AL031290 AL136983 BC015438 BC142697 CH471067
GenPept AAH15438 AAI42698 BAA22958 BAG58151 CAH71678 CAH71679 CAI20555 CAI20556 CAI22718 CAI22719 CAI23463 CAI23464 EAW91007
RNA Seq Atlas 460

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca