Version 5.4
Mus musculus Gene: Slitrk6
Summary
InnateDB Gene IDBG-185909.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Slitrk6
Gene Name SLIT and NTRK-like family, member 6
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000045871
Encoded Proteins
IDBP-185911
SLIT and NTRK-like family, member 6
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000184564:
Members of the SLITRK family, such as SLITRK6, are integral membrane proteins with 2 N-terminal leucine-rich repeat (LRR) domains similar to those of SLIT proteins (see SLIT1; MIM 603742). Most SLITRKs, including SLITRK6, also have C-terminal regions that share homology with neurotrophin receptors (see NTRK1; MIM 191315). SLITRKs are expressed predominantly in neural tissues and have neurite-modulating activity (Aruga et al., 2003 [PubMed 14557068]).[supplied by OMIM, Mar 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 14:110748578-110755149
Strand Reverse strand
Band E3
Transcripts
ENSMUST00000078386 ENSMUSP00000077492
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0005515 protein binding
Biological Process
GO:0001964 startle response
GO:0002088 lens development in camera-type eye
GO:0002093 auditory receptor cell morphogenesis
GO:0007409 axonogenesis
GO:0007416 synapse assembly
GO:0007601 visual perception
GO:0007605 sensory perception of sound
GO:0008344 adult locomotory behavior
GO:0021562 vestibulocochlear nerve development
GO:0031223 auditory behavior
GO:0035264 multicellular organism growth
GO:0042472 inner ear morphogenesis
GO:0043010 camera-type eye development
GO:0048812 neuron projection morphogenesis
GO:0060005 vestibular reflex
GO:0060007 linear vestibuloocular reflex
GO:0060384 innervation
GO:0090102 cochlea development
Cellular Component
GO:0005887 integral component of plasma membrane
GO:0009986 cell surface
GO:0016021 integral component of membrane
GO:0071944 cell periphery
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000184564
View Gene Order
ENSBTAG00000004388
Not yet available
Pathway Predictions based on Human Orthology Data
NETPATH
NetPath_4
EGFR1 pathway
REACTOME
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.405016 Mm.49728
RefSeq NM_175499
OMIM
CCDS CCDS27326
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca