Version 5.4
Homo sapiens Gene: SEC16B
Summary
InnateDB Gene IDBG-105027.7
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SEC16B
Gene Name SEC16 homolog B (S. cerevisiae)
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000120341
Encoded Proteins
IDBP-105031
Protein transport protein Sec16B
IDBP-603474
Protein transport protein Sec16B
IDBP-592299
Protein transport protein Sec16B
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary SEC16B is a mammalian homolog of S. cerevisiae Sec16 that is required for organization of transitional endoplasmic reticulum (ER) sites and protein export (Bhattacharyya and Glick, 2007 [PubMed 17192411]).[supplied by OMIM, Jun 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 1:177923956-177984303
Strand Reverse strand
Band q25.2
Transcripts
ENST00000308284 ENSP00000308339
ENST00000327037
ENST00000495165
ENST00000464631 ENSP00000431727
ENST00000526773
ENST00000527976 ENSP00000435101
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0007029 endoplasmic reticulum organization
GO:0007031 peroxisome organization
GO:0010628 positive regulation of gene expression
GO:0015031 protein transport
GO:0016559 peroxisome fission
GO:0048208 COPII vesicle coating
GO:0070863 positive regulation of protein exit from endoplasmic reticulum
GO:0070972 protein localization to endoplasmic reticulum
Cellular Component
GO:0000139 Golgi membrane
GO:0005789 endoplasmic reticulum membrane
GO:0043231 intracellular membrane-bounded organelle
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000026589
View Gene Order
ENSBTAG00000000854
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_033127
HUGO
OMIM
CCDS CCDS44281
HPRD 11491
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca