Download Imported Experimentally Validated Interactions

Please note these files are zipped for downloading but are extremely large when uncompressed. XML downloads are provided in validated PSI-MI XML 2.5 COMPACT format. TAB downloads are provided in PSI-MITAB 2.7 tab-limited text format. You can also access and download all experimentally validated interactions in various formats from our PSICQUIC web service: E.g., in PSI-MITAB 2.5, in PSI-MITAB 2.7, in PSI-XML 2.5, or in XGMML.

BIOGRID Data in InnateDB (2014-12-07)

XML

MINT Data in InnateDB (2014-12-07)

XML

INTACT Data in InnateDB (2014-12-07)

XML

DIP Data in InnateDB (2014-12-07)

XML

BIND Data in InnateDB (2014-12-07)

XML

All Experimentally Validated Interactions (updated weekly)

TAB

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1)

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca