Version 5.4
Mus musculus Gene: Prdm10
Summary
InnateDB Gene IDBG-146909.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Prdm10
Gene Name PR domain containing 10
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000042496
Encoded Proteins
IDBP-146911
PR domain containing 10
IDBP-401476
PR domain containing 10
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000170325:
The protein encoded by this gene is a transcription factor that contains C2H2-type zinc-fingers. It also contains a positive regulatory domain, which has been found in several other zinc-finger transcription factors including those involved in B cell differentiation and tumor suppression. Studies of the mouse counterpart suggest that this protein may be involved in the development of the central nerve system (CNS), as well as in the pathogenesis of neuronal storage disease. Multiple alternatively spliced transcript variants encoding distinct isoforms have been observed. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 9:31280538-31378543
Strand Forward strand
Band A4
Transcripts
ENSMUST00000074510 ENSMUSP00000074104
ENSMUST00000117389 ENSMUSP00000112588
ENSMUST00000136144
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0008168 methyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0008150 biological_process
GO:0032259 methylation
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000170325
View Gene Order
ENSBTAG00000019001
Not yet available
Cross-References
SwissProt Q3UTQ7
TrEMBL
UniProt Splice Variant
Entrez Gene 382066
UniGene Mm.335039 Mm.417183
RefSeq NM_001080817
OMIM
CCDS CCDS40570
HPRD
IMGT
MGI ID MGI:2682952
MGI Symbol Prdm10
EMBL AC167244 AK139221 BC064128
GenPept AAH64128 BAE23923
RNA Seq Atlas 382066

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca