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InnateDB Gene
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IDBG-299982.4
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Last Modified
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2014-10-13 [Report errors or provide feedback]
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Gene Symbol
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COL6A4P1
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Gene Name
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collagen, type VI, alpha 4 pseudogene 1
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Synonyms
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Species
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Homo sapiens
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Ensembl Gene
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ENSG00000230524
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Encoded Proteins
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Protein Structure
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Useful resources
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Stemformatics
EHFPI
ImmGen
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| Summary |
This transcribed pseudogene represents the 5' end of a presumed ortholog to a mouse gene which encodes a collagen VI alpha 4 chain protein (GeneID 68553). No complete ORF of comparable size to the mouse protein is found in this gene. The predicted protein lacks a signal peptide; however, this truncated collagen polypeptide may have achieved a different function as suggested by PubMed ID: 18622395. Evidence of in vivo translation is incomplete. A large chromosome break separates this pseudogene from the 3' end of the presumed ortholog (COL6A4P2, GeneID 646300) which is located downstream at chromosome 3q21.3. [provided by RefSeq, Jun 2009]
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| Type |
unitary_pseudogene
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Genomic Location
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Chromosome 3:15151833-15205959
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Strand
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Reverse strand
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Band
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p25.1
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Transcripts
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Number of Interactions
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This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
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No orthologs found for this gene |
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SwissProt
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TrEMBL
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UniProt Splice Variant
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Entrez Gene
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UniGene
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Hs.722756
Hs.722983
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RefSeq
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HUGO
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OMIM
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CCDS
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| HPRD |
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IMGT
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EMBL
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GenPept
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RNA Seq Atlas
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Version 5.4