Version 5.4
Homo sapiens Gene: SYNPO2
Summary
InnateDB Gene IDBG-35631.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SYNPO2
Gene Name synaptopodin 2
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000172403
Encoded Proteins
IDBP-35633
synaptopodin 2
IDBP-376662
synaptopodin 2
IDBP-376663
synaptopodin 2
IDBP-376667
synaptopodin 2
IDBP-477397
synaptopodin 2
IDBP-809557
synaptopodin 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 4:118850688-119061247
Strand Forward strand
Band q26
Transcripts
ENST00000307142 ENSP00000306015
ENST00000434046 ENSP00000390965
ENST00000429713 ENSP00000395143
ENST00000448416 ENSP00000412623
ENST00000504178 ENSP00000425496
ENST00000610556 ENSP00000484885
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 17 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 17 [view]
Protein-Protein 17 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003779 actin binding
GO:0005515 protein binding
GO:0051371 muscle alpha-actinin binding
GO:0071889 14-3-3 protein binding
Biological Process
Cellular Component
GO:0005634 nucleus
GO:0015629 actin cytoskeleton
GO:0030018 Z disc
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000050315
View Gene Order
ENSBTAG00000006434
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.655519
RefSeq NM_001128933 NM_001128934 NM_001286754 NM_001286755 NM_133477
HUGO
OMIM
CCDS CCDS34054 CCDS47128 CCDS47129 CCDS75185 CCDS75186
HPRD 15456
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca